这项工作提出了使用遗传算法(GA)在追踪和识别使用计算机断层扫描(CT)图像的人心包轮廓的过程中。我们假设心包的每个切片都可以通过椭圆建模,椭圆形需要最佳地确定其参数。最佳椭圆将是紧随心包轮廓的紧密椭圆形,因此,将人心脏的心外膜和纵隔脂肪适当地分开。追踪和自动识别心包轮廓辅助药物的医学诊断。通常,由于所需的努力,此过程是手动完成或根本不完成的。此外,检测心包可能会改善先前提出的自动化方法,这些方法将与人心脏相关的两种类型的脂肪分开。这些脂肪的量化提供了重要的健康风险标记信息,因为它们与某些心血管病理的发展有关。最后,我们得出的结论是,GA在可行数量的处理时间内提供了令人满意的解决方案。
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ICECUBE是一种用于检测1 GEV和1 PEV之间大气和天体中微子的光学传感器的立方公斤阵列,该阵列已部署1.45 km至2.45 km的南极的冰盖表面以下1.45 km至2.45 km。来自ICE探测器的事件的分类和重建在ICeCube数据分析中起着核心作用。重建和分类事件是一个挑战,这是由于探测器的几何形状,不均匀的散射和冰中光的吸收,并且低于100 GEV的光,每个事件产生的信号光子数量相对较少。为了应对这一挑战,可以将ICECUBE事件表示为点云图形,并将图形神经网络(GNN)作为分类和重建方法。 GNN能够将中微子事件与宇宙射线背景区分开,对不同的中微子事件类型进行分类,并重建沉积的能量,方向和相互作用顶点。基于仿真,我们提供了1-100 GEV能量范围的比较与当前ICECUBE分析中使用的当前最新最大似然技术,包括已知系统不确定性的影响。对于中微子事件分类,与当前的IceCube方法相比,GNN以固定的假阳性速率(FPR)提高了信号效率的18%。另外,GNN在固定信号效率下将FPR的降低超过8(低于半百分比)。对于能源,方向和相互作用顶点的重建,与当前最大似然技术相比,分辨率平均提高了13%-20%。当在GPU上运行时,GNN能够以几乎是2.7 kHz的中位数ICECUBE触发速率的速率处理ICECUBE事件,这打开了在在线搜索瞬态事件中使用低能量中微子的可能性。
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本文基于Loeffler离散余弦变换(DCT)算法引入了矩阵参数化方法。结果,提出了一类新的八点DCT近似值,能够统一文献中几个八点DCT近似的数学形式主义。帕累托效率的DCT近似是通过多准则优化获得的,其中考虑了计算复杂性,接近性和编码性能。有效的近似及其缩放的16和32点版本嵌入了图像和视频编码器中,包括类似JPEG的编解码器以及H.264/AVC和H.265/HEVC标准。将结果与未修饰的标准编解码器进行比较。在Xilinx VLX240T FPGA上映射并实现了有效的近似值,并评估了面积,速度和功耗。
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Majorana示威者是一项领先的实验,寻找具有高纯净锗探测器(HPGE)的中性s中性双β衰变。机器学习提供了一种最大化这些检测器提供的信息量的新方法,但是与传统分析相比,数据驱动的性质使其不可解释。一项可解释性研究揭示了机器的决策逻辑,使我们能够从机器中学习以反馈传统分析。在这项工作中,我们介绍了Majorana演示者数据的第一个机器学习分析。这也是对任何锗探测器实验的第一个可解释的机器学习分析。训练了两个梯度增强的决策树模型,以从数据中学习,并进行了基于游戏理论的模型可解释性研究,以了解分类功率的起源。通过从数据中学习,该分析识别重建参数之间的相关性,以进一步增强背景拒绝性能。通过从机器中学习,该分析揭示了新的背景类别对相互利用的标准Majorana分析的重要性。该模型与下一代锗探测器实验(如传说)高度兼容,因为它可以同时在大量探测器上进行训练。
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制定了具有机器学习模拟(骆驼)项目的宇宙学和天体物理学,通过数千名宇宙的流体动力模拟和机器学习将宇宙学与天体物理学结合起来。骆驼包含4,233个宇宙学仿真,2,049个n-body和2,184个最先进的流体动力模拟,在参数空间中采样巨大的体积。在本文中,我们介绍了骆驼公共数据发布,描述了骆驼模拟的特性和由它们产生的各种数据产品,包括光环,次麦,银河系和空隙目录,功率谱,Bispectra,Lyman - $ \ Alpha $光谱,概率分布函数,光环径向轮廓和X射线光子列表。我们还释放了超过骆驼 - 山姆的数十亿个星系的目录:与Santa Cruz半分析模型相结合的大量N身体模拟。我们释放包含350多个Terabytes的所有数据,并包含143,922个快照,数百万光环,星系和摘要统计数据。我们提供有关如何访问,下载,读取和处理数据AT \ URL {https://camels.readthedocs.io}的进一步技术详细信息。
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放射线学使用定量医学成像特征来预测临床结果。目前,在新的临床应用中,必须通过启发式试验和纠正过程手动完成各种可用选项的最佳放射组方法。在这项研究中,我们提出了一个框架,以自动优化每个应用程序的放射线工作流程的构建。为此,我们将放射线学作为模块化工作流程,并为每个组件包含大量的常见算法。为了优化每个应用程序的工作流程,我们使用随机搜索和结合使用自动化机器学习。我们在十二个不同的临床应用中评估我们的方法,从而在曲线下导致以下区域:1)脂肪肉瘤(0.83); 2)脱粘型纤维瘤病(0.82); 3)原发性肝肿瘤(0.80); 4)胃肠道肿瘤(0.77); 5)结直肠肝转移(0.61); 6)黑色素瘤转移(0.45); 7)肝细胞癌(0.75); 8)肠系膜纤维化(0.80); 9)前列腺癌(0.72); 10)神经胶质瘤(0.71); 11)阿尔茨海默氏病(0.87);和12)头颈癌(0.84)。我们表明,我们的框架具有比较人类专家的竞争性能,优于放射线基线,并且表现相似或优于贝叶斯优化和更高级的合奏方法。最后,我们的方法完全自动优化了放射线工作流的构建,从而简化了在新应用程序中对放射线生物标志物的搜索。为了促进可重复性和未来的研究,我们公开发布了六个数据集,框架的软件实施以及重现这项研究的代码。
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While the brain connectivity network can inform the understanding and diagnosis of developmental dyslexia, its cause-effect relationships have not yet enough been examined. Employing electroencephalography signals and band-limited white noise stimulus at 4.8 Hz (prosodic-syllabic frequency), we measure the phase Granger causalities among channels to identify differences between dyslexic learners and controls, thereby proposing a method to calculate directional connectivity. As causal relationships run in both directions, we explore three scenarios, namely channels' activity as sources, as sinks, and in total. Our proposed method can be used for both classification and exploratory analysis. In all scenarios, we find confirmation of the established right-lateralized Theta sampling network anomaly, in line with the temporal sampling framework's assumption of oscillatory differences in the Theta and Gamma bands. Further, we show that this anomaly primarily occurs in the causal relationships of channels acting as sinks, where it is significantly more pronounced than when only total activity is observed. In the sink scenario, our classifier obtains 0.84 and 0.88 accuracy and 0.87 and 0.93 AUC for the Theta and Gamma bands, respectively.
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Differentiable Architecture Search (DARTS) has attracted considerable attention as a gradient-based Neural Architecture Search (NAS) method. Since the introduction of DARTS, there has been little work done on adapting the action space based on state-of-art architecture design principles for CNNs. In this work, we aim to address this gap by incrementally augmenting the DARTS search space with micro-design changes inspired by ConvNeXt and studying the trade-off between accuracy, evaluation layer count, and computational cost. To this end, we introduce the Pseudo-Inverted Bottleneck conv block intending to reduce the computational footprint of the inverted bottleneck block proposed in ConvNeXt. Our proposed architecture is much less sensitive to evaluation layer count and outperforms a DARTS network with similar size significantly, at layer counts as small as 2. Furthermore, with less layers, not only does it achieve higher accuracy with lower GMACs and parameter count, GradCAM comparisons show that our network is able to better detect distinctive features of target objects compared to DARTS.
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The availability of frequent and cost-free satellite images is in growing demand in the research world. Such satellite constellations as Landsat 8 and Sentinel-2 provide a massive amount of valuable data daily. However, the discrepancy in the sensors' characteristics of these satellites makes it senseless to use a segmentation model trained on either dataset and applied to another, which is why domain adaptation techniques have recently become an active research area in remote sensing. In this paper, an experiment of domain adaptation through style-transferring is conducted using the HRSemI2I model to narrow the sensor discrepancy between Landsat 8 and Sentinel-2. This paper's main contribution is analyzing the expediency of that approach by comparing the results of segmentation using domain-adapted images with those without adaptation. The HRSemI2I model, adjusted to work with 6-band imagery, shows significant intersection-over-union performance improvement for both mean and per class metrics. A second contribution is providing different schemes of generalization between two label schemes - NALCMS 2015 and CORINE. The first scheme is standardization through higher-level land cover classes, and the second is through harmonization validation in the field.
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The number of international benchmarking competitions is steadily increasing in various fields of machine learning (ML) research and practice. So far, however, little is known about the common practice as well as bottlenecks faced by the community in tackling the research questions posed. To shed light on the status quo of algorithm development in the specific field of biomedical imaging analysis, we designed an international survey that was issued to all participants of challenges conducted in conjunction with the IEEE ISBI 2021 and MICCAI 2021 conferences (80 competitions in total). The survey covered participants' expertise and working environments, their chosen strategies, as well as algorithm characteristics. A median of 72% challenge participants took part in the survey. According to our results, knowledge exchange was the primary incentive (70%) for participation, while the reception of prize money played only a minor role (16%). While a median of 80 working hours was spent on method development, a large portion of participants stated that they did not have enough time for method development (32%). 25% perceived the infrastructure to be a bottleneck. Overall, 94% of all solutions were deep learning-based. Of these, 84% were based on standard architectures. 43% of the respondents reported that the data samples (e.g., images) were too large to be processed at once. This was most commonly addressed by patch-based training (69%), downsampling (37%), and solving 3D analysis tasks as a series of 2D tasks. K-fold cross-validation on the training set was performed by only 37% of the participants and only 50% of the participants performed ensembling based on multiple identical models (61%) or heterogeneous models (39%). 48% of the respondents applied postprocessing steps.
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